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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904635.1_cds_XP_016454773.1_48763
CDS Infomation

[gene=LOC107778957] [db_xref=GeneID:107778957] [protein=protein NRT1/ PTR FAMILY 5.5-like] [protein_id=XP_016454773.1] [location=complement(join(57052..58012,58284..58804,59486..59700,59962..59983))] [gbkey=CDS]
Sequence

ATGATGGTTTACAGAATCTTATCCATTACTTGGGCTAATATTCCCGTGCATTATGCTCTG
TGGATGTTGATGGTGTACTTGACTGATGTATGGAAGCTCAAACTCACAGACGCAGCTGCA
ATTGTCAGCGTCTTCTTTGGTTTGCTGACAATCCTACAGTCAGTCATGCTGTTTTCTGCT
CATGGTTTATTCGGCAACTATCCAGTGCTAATGGGTTCTATATTCGCCTATTGTGTGGGC
ATGGGTTTTTTAACAATGTCAACACCACCAGTCCTTGCTAAGGCTACTGGAACATGCAGT
GCTTATCAGCCTGAATGCATCGGTGAAGGCCAGCGTATACTCTTCTACATAGCATTGGCT
CTGTGTGCTCTGGGAACAGCTGGTCAAGCAGTAAGCTTACGCGCTTTCCTACTTGAGCAA
CTTGGACAAAATGCTAACAGTCCGTCTATCTGGTCTCTGCAACGTTATGCAGTGATTCTG
TTCAAAGCTGCTGCTGTTTTGGGATTTTCATACATATCACCGTGGTCGCTTTGGTTTGGT
GTCCCAGCAATATGTTACACAGTTGCAGCCTTTATTTTCTTTAGTGGATCTTGTACCTAT
AAGTATGTTAAACCAGAAGGTAGCCCGATCACTACTTTATTCCGGGTCTTTGCAGCGTCT
ATCTCTAAGTTATTCTATCGACTGCCTACAGATGTGTCACAGCTGTATAACATATCTGAC
CCTGGCATACAATCACTGCCTCACACCAATAGCCTGAGGTGTCTTGATAAGGCTGCAATA
ATCTTGCCCGACCAGACTCTAGAGCAGCAACTGAGGAATAGATGGAGGCTTTGCAGCGTT
GCTGAGGTTGAAGCTACTAAATTTGTAATTCGCAAGTTCCCACTGTGTATGACCTACATT
CTTGGTGGGGTTTTGACTTCTCTGTCATACACCTACTTTCTAGAGCAAGCAAAGACTATG
AACAATAAGGTCGGGAACCTAAGAATTCCTCTAGCTGTCTTCCTATGGTTCCAATTTGAA
GCAAGAGAACAGTTTCAAAAAATATATCACATATTTATGAATTGGCGATGGGGTTCAGAA
GCAAAACCATCAGCTCCTAGAGTGGGGGTTGCAGTATCCATCATTTTGGGGGTATTATGC
ACTATTACTGCTGCAAAAGTGGAGTCAAGAAGACTCGCTATGGTAAAGATGTATAGTTTA
GCAGGCGAGACGGACGAAAAAATTCCAATGACTGTGTTCTGGCTGCTTCCACAGTATCTT
CTTCTTGGGGCAGCAGACGGGATGTTTGGAAACAGCCTGGAGAATTACTACAATATGTAC
TTTGAGCCCATATCTGCCTCGTATATGATCACTGCCGTCAATTTGATGCACGGGTTAGGA
TGTATAAGCAACATTTTGATAGTGTACGTAGTGAGTAAGGTTAGTCAGAGGGGGAATAAA
GTAAGTTGGCTTCAGGATACGCTGAATAAGAGTCGAGTTGATAAGTATTACTGGACTCTG
TCGTGGCTATTAGCTATTGCATTTGTTTTGTTTGTTGTAATTAGTCTGTGGCATGCATAC
AGGCGATCAAAAGAAGAAGCACGAACAGTGCACGTTGAACGAAGTGTTGCCTACGTTGGG
GGTGAACTAATTTATGAGACGACAATTACAATGGGAAACAGGCGCAGTAACAACATCATC
GCCATGCTTCCTTCTTTTGATATGTTCATACATTACTAG

Peptide Sequence

PEP ID

XP_016454773.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.5-like [Nicotiana tabacum]
Sequence

MMVYRILSITWANIPVHYALWMLMVYLTDVWKLKLTDAAAIVSVFFGLLTILQSVMLFSA
HGLFGNYPVLMGSIFAYCVGMGFLTMSTPPVLAKATGTCSAYQPECIGEGQRILFYIALA
LCALGTAGQAVSLRAFLLEQLGQNANSPSIWSLQRYAVILFKAAAVLGFSYISPWSLWFG
VPAICYTVAAFIFFSGSCTYKYVKPEGSPITTLFRVFAASISKLFYRLPTDVSQLYNISD
PGIQSLPHTNSLRCLDKAAIILPDQTLEQQLRNRWRLCSVAEVEATKFVIRKFPLCMTYI
LGGVLTSLSYTYFLEQAKTMNNKVGNLRIPLAVFLWFQFEAREQFQKIYHIFMNWRWGSE
AKPSAPRVGVAVSIILGVLCTITAAKVESRRLAMVKMYSLAGETDEKIPMTVFWLLPQYL
LLGAADGMFGNSLENYYNMYFEPISASYMITAVNLMHGLGCISNILIVYVVSKVSQRGNK
VSWLQDTLNKSRVDKYYWTLSWLLAIAFVLFVVISLWHAYRRSKEEARTVHVERSVAYVG
GELIYETTITMGNRRSNNIIAMLPSFDMFIHY

Transcript Sequence

Gene sequence data has not been registered.